Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VimP20152 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
VimP20152 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
VimP20152 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
VimP20152 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
VimP20152 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
VimP20152 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
VimP20152 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
VimP20152 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
VimP20152 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VimP20152 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
VimP20152 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VimP20152 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VimP20152 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VimP20152 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
VimP20152 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
VimP20152 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VimP20152 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.82□□□□□ -0.36
VimP20152 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
VimP20152 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VimP20152 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VimP20152 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VimP20152 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VimP20152 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VimP20152 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VimP20152 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
VimP20152 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VimP20152 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VimP20152 Gm15653-201ENSMUST00000119247 907 ntBASIC12.82□□□□□ -0.36
VimP20152 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
VimP20152 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.82□□□□□ -0.36
VimP20152 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.82□□□□□ -0.36
VimP20152 Gm18905-201ENSMUST00000205454 928 ntBASIC12.82□□□□□ -0.36
VimP20152 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.82□□□□□ -0.36
VimP20152 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VimP20152 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VimP20152 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VimP20152 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VimP20152 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
VimP20152 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VimP20152 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VimP20152 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VimP20152 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
VimP20152 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
VimP20152 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
VimP20152 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
VimP20152 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.82□□□□□ -0.36
VimP20152 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
VimP20152 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VimP20152 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.81□□□□□ -0.36
VimP20152 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VimP20152 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VimP20152 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VimP20152 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VimP20152 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VimP20152 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.81□□□□□ -0.36
VimP20152 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VimP20152 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VimP20152 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VimP20152 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VimP20152 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.81□□□□□ -0.36
VimP20152 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VimP20152 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VimP20152 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VimP20152 Gm12585-201ENSMUST00000117307 290 ntBASIC12.81□□□□□ -0.36
VimP20152 Gm15240-201ENSMUST00000118156 720 ntBASIC12.81□□□□□ -0.36
VimP20152 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.81□□□□□ -0.36
VimP20152 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VimP20152 Gm17971-201ENSMUST00000190239 806 ntBASIC12.81□□□□□ -0.36
VimP20152 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.81□□□□□ -0.36
VimP20152 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
VimP20152 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VimP20152 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
VimP20152 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VimP20152 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VimP20152 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
VimP20152 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VimP20152 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VimP20152 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
VimP20152 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.81□□□□□ -0.36
VimP20152 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
VimP20152 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.81□□□□□ -0.36
VimP20152 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
VimP20152 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VimP20152 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
VimP20152 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VimP20152 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VimP20152 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VimP20152 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
VimP20152 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
VimP20152 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
VimP20152 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.8□□□□□ -0.36
VimP20152 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
VimP20152 Gm18889-201ENSMUST00000174284 929 ntBASIC12.8□□□□□ -0.36
VimP20152 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
VimP20152 Gm35960-201ENSMUST00000202712 767 ntBASIC12.8□□□□□ -0.36
VimP20152 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.8□□□□□ -0.36
VimP20152 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VimP20152 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VimP20152 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms