Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.46□□□□□ -0.73
Cxcl1P12850 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl1P12850 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC10.46□□□□□ -0.73
Cxcl1P12850 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Cxcl1P12850 Gm28631-201ENSMUST00000190740 334 ntBASIC10.46□□□□□ -0.73
Cxcl1P12850 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.46□□□□□ -0.73
Cxcl1P12850 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl1P12850 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC10.46□□□□□ -0.73
Cxcl1P12850 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl1P12850 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cxcl1P12850 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl1P12850 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl1P12850 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl1P12850 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.46□□□□□ -0.74
Cxcl1P12850 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.46□□□□□ -0.74
Cxcl1P12850 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl1P12850 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Cxcl1P12850 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl1P12850 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl1P12850 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.46□□□□□ -0.74
Cxcl1P12850 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.46□□□□□ -0.74
Cxcl1P12850 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.74
Cxcl1P12850 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl1P12850 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl1P12850 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Cxcl1P12850 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl1P12850 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl1P12850 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl1P12850 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl1P12850 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl1P12850 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl1P12850 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl1P12850 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl1P12850 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cxcl1P12850 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Cxcl1P12850 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.45□□□□□ -0.74
Cxcl1P12850 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Gm14704-201ENSMUST00000120300 874 ntBASIC10.45□□□□□ -0.74
Cxcl1P12850 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC10.45□□□□□ -0.74
Cxcl1P12850 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.45□□□□□ -0.74
Cxcl1P12850 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.45□□□□□ -0.74
Cxcl1P12850 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.45□□□□□ -0.74
Cxcl1P12850 Gm35960-201ENSMUST00000202712 767 ntBASIC10.45□□□□□ -0.74
Cxcl1P12850 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.45□□□□□ -0.74
Cxcl1P12850 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.45□□□□□ -0.74
Cxcl1P12850 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.45□□□□□ -0.74
Cxcl1P12850 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Cxcl1P12850 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Cxcl1P12850 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.45□□□□□ -0.74
Cxcl1P12850 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Cxcl1P12850 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cxcl1P12850 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cxcl1P12850 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cxcl1P12850 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cxcl1P12850 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cxcl1P12850 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cxcl1P12850 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.44□□□□□ -0.74
Cxcl1P12850 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cxcl1P12850 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cxcl1P12850 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cxcl1P12850 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cxcl1P12850 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cxcl1P12850 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Cxcl1P12850 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cxcl1P12850 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cxcl1P12850 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.44□□□□□ -0.74
Cxcl1P12850 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cxcl1P12850 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cxcl1P12850 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.44□□□□□ -0.74
Cxcl1P12850 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.44□□□□□ -0.74
Cxcl1P12850 Gm42599-201ENSMUST00000201308 469 ntBASIC10.44□□□□□ -0.74
Cxcl1P12850 Gm6218-201ENSMUST00000219812 628 ntBASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms