Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.3□□□□□ -0.6
P06344 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P06344 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
P06344 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
P06344 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06344 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06344 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
P06344 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
P06344 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06344 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06344 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.29□□□□□ -0.6
P06344 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06344 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06344 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
P06344 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.29□□□□□ -0.6
P06344 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
P06344 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
P06344 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
P06344 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
P06344 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
P06344 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
P06344 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.29□□□□□ -0.6
P06344 Gm13297-201ENSMUST00000120205 934 ntBASIC11.29□□□□□ -0.6
P06344 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.29□□□□□ -0.6
P06344 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.29□□□□□ -0.6
P06344 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.29□□□□□ -0.6
P06344 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P06344 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.29□□□□□ -0.6
P06344 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.29□□□□□ -0.6
P06344 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.29□□□□□ -0.6
P06344 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.29□□□□□ -0.6
P06344 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.29□□□□□ -0.6
P06344 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
P06344 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06344 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06344 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06344 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.29□□□□□ -0.6
P06344 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.29□□□□□ -0.6
P06344 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.29□□□□□ -0.6
P06344 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.29□□□□□ -0.6
P06344 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
P06344 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06344 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06344 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
P06344 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06344 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
P06344 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
P06344 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06344 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06344 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P06344 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06344 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P06344 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P06344 Gm10434-201ENSMUST00000101158 471 ntBASIC11.28□□□□□ -0.6
P06344 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P06344 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.28□□□□□ -0.6
P06344 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.28□□□□□ -0.6
P06344 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
P06344 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P06344 Gm2991-201ENSMUST00000173338 480 ntBASIC11.28□□□□□ -0.6
P06344 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.28□□□□□ -0.6
P06344 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.28□□□□□ -0.6
P06344 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P06344 Gm24526-201ENSMUST00000082921 158 ntBASIC11.28□□□□□ -0.6
P06344 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P06344 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06344 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06344 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P06344 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06344 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
P06344 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06344 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
P06344 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06344 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06344 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06344 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06344 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06344 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.28□□□□□ -0.6
P06344 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06344 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06344 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06344 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06344 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
P06344 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.28□□□□□ -0.6
P06344 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
P06344 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.27□□□□□ -0.6
P06344 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
P06344 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
P06344 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
P06344 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
P06344 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
P06344 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
P06344 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
P06344 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.6
P06344 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
P06344 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.27□□□□□ -0.61
P06344 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms