Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ClppO88696 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClppO88696 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.43□□□□□ -0.42
ClppO88696 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
ClppO88696 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
ClppO88696 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.43□□□□□ -0.42
ClppO88696 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ClppO88696 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClppO88696 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ClppO88696 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClppO88696 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClppO88696 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClppO88696 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClppO88696 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.43□□□□□ -0.42
ClppO88696 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClppO88696 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClppO88696 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClppO88696 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClppO88696 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClppO88696 Gm8805-201ENSMUST00000117848 313 ntBASIC12.43□□□□□ -0.42
ClppO88696 Gm13786-201ENSMUST00000122371 333 ntBASIC12.43□□□□□ -0.42
ClppO88696 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.43□□□□□ -0.42
ClppO88696 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ClppO88696 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.43□□□□□ -0.42
ClppO88696 Gm29396-201ENSMUST00000185659 716 ntBASIC12.43□□□□□ -0.42
ClppO88696 Gm28693-202ENSMUST00000190758 331 ntBASIC12.43□□□□□ -0.42
ClppO88696 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClppO88696 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ClppO88696 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClppO88696 Gm19163-201ENSMUST00000223313 780 ntBASIC12.43□□□□□ -0.42
ClppO88696 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.43□□□□□ -0.42
ClppO88696 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClppO88696 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.43□□□□□ -0.42
ClppO88696 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClppO88696 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClppO88696 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
ClppO88696 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ClppO88696 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClppO88696 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
ClppO88696 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
ClppO88696 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ClppO88696 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClppO88696 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClppO88696 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ClppO88696 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.42□□□□□ -0.42
ClppO88696 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClppO88696 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClppO88696 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ClppO88696 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClppO88696 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClppO88696 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClppO88696 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClppO88696 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClppO88696 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.42□□□□□ -0.42
ClppO88696 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClppO88696 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.42□□□□□ -0.42
ClppO88696 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClppO88696 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ClppO88696 Gm16479-201ENSMUST00000121706 932 ntBASIC12.42□□□□□ -0.42
ClppO88696 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.42□□□□□ -0.42
ClppO88696 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ClppO88696 Gm7783-201ENSMUST00000204795 781 ntBASIC12.42□□□□□ -0.42
ClppO88696 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClppO88696 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClppO88696 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
ClppO88696 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClppO88696 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ClppO88696 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClppO88696 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClppO88696 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.42□□□□□ -0.42
ClppO88696 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ClppO88696 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClppO88696 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClppO88696 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ClppO88696 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.42□□□□□ -0.42
ClppO88696 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
ClppO88696 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClppO88696 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClppO88696 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClppO88696 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ClppO88696 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClppO88696 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClppO88696 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClppO88696 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClppO88696 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClppO88696 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ClppO88696 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
ClppO88696 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
ClppO88696 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClppO88696 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClppO88696 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClppO88696 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClppO88696 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
ClppO88696 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
ClppO88696 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ClppO88696 Gm11591-201ENSMUST00000120063 702 ntBASIC12.41□□□□□ -0.42
ClppO88696 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.41□□□□□ -0.42
ClppO88696 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
ClppO88696 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.41□□□□□ -0.42
ClppO88696 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms