Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.54□□□□□ -0.4
Pdlim1O70400 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim1O70400 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim1O70400 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.54□□□□□ -0.4
Pdlim1O70400 Gm11793-201ENSMUST00000120433 981 ntBASIC12.54□□□□□ -0.4
Pdlim1O70400 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim1O70400 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.54□□□□□ -0.4
Pdlim1O70400 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.54□□□□□ -0.4
Pdlim1O70400 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.54□□□□□ -0.4
Pdlim1O70400 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.54□□□□□ -0.4
Pdlim1O70400 Gm27572-201ENSMUST00000183702 255 ntBASIC12.54□□□□□ -0.4
Pdlim1O70400 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim1O70400 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.54□□□□□ -0.4
Pdlim1O70400 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.54□□□□□ -0.4
Pdlim1O70400 Gm44405-201ENSMUST00000198952 126 ntBASIC12.54□□□□□ -0.4
Pdlim1O70400 Gm43118-201ENSMUST00000199149 775 ntBASIC12.54□□□□□ -0.4
Pdlim1O70400 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.54□□□□□ -0.4
Pdlim1O70400 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.54□□□□□ -0.4
Pdlim1O70400 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim1O70400 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim1O70400 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim1O70400 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim1O70400 Gm22058-201ENSMUST00000083393 310 ntBASIC12.54□□□□□ -0.4
Pdlim1O70400 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim1O70400 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim1O70400 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pdlim1O70400 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim1O70400 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim1O70400 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim1O70400 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim1O70400 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim1O70400 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim1O70400 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim1O70400 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim1O70400 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.54□□□□□ -0.4
Pdlim1O70400 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pdlim1O70400 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.53□□□□□ -0.4
Pdlim1O70400 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.53□□□□□ -0.4
Pdlim1O70400 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.53□□□□□ -0.4
Pdlim1O70400 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Mospd4-201ENSMUST00000180618 576 ntBASIC12.53□□□□□ -0.4
Pdlim1O70400 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.53□□□□□ -0.4
Pdlim1O70400 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.53□□□□□ -0.4
Pdlim1O70400 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Gm42693-201ENSMUST00000196779 631 ntBASIC12.53□□□□□ -0.4
Pdlim1O70400 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.53□□□□□ -0.4
Pdlim1O70400 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Gm26035-201ENSMUST00000083065 308 ntBASIC12.53□□□□□ -0.4
Pdlim1O70400 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.53□□□□□ -0.4
Pdlim1O70400 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.53□□□□□ -0.4
Pdlim1O70400 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.53□□□□□ -0.4
Pdlim1O70400 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.53□□□□□ -0.4
Pdlim1O70400 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pdlim1O70400 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.53□□□□□ -0.4
Pdlim1O70400 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pdlim1O70400 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.53□□□□□ -0.4
Pdlim1O70400 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pdlim1O70400 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pdlim1O70400 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pdlim1O70400 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.52□□□□□ -0.4
Pdlim1O70400 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pdlim1O70400 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pdlim1O70400 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pdlim1O70400 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.52□□□□□ -0.4
Pdlim1O70400 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pdlim1O70400 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.52□□□□□ -0.4
Pdlim1O70400 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Pdlim1O70400 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim1O70400 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim1O70400 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Pdlim1O70400 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim1O70400 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim1O70400 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim1O70400 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pdlim1O70400 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.52□□□□□ -0.41
Pdlim1O70400 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms