Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alx4O35137 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alx4O35137 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.3□□□□□ -0.6
Alx4O35137 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.3□□□□□ -0.6
Alx4O35137 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Alx4O35137 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alx4O35137 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alx4O35137 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Alx4O35137 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Alx4O35137 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.3□□□□□ -0.6
Alx4O35137 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alx4O35137 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
Alx4O35137 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alx4O35137 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Alx4O35137 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alx4O35137 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alx4O35137 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Alx4O35137 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alx4O35137 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alx4O35137 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alx4O35137 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Alx4O35137 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alx4O35137 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alx4O35137 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alx4O35137 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alx4O35137 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Alx4O35137 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.29□□□□□ -0.6
Alx4O35137 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alx4O35137 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alx4O35137 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Alx4O35137 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.29□□□□□ -0.6
Alx4O35137 Map1b-203ENSMUST00000223725 2669 ntBASIC11.29□□□□□ -0.6
Alx4O35137 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Alx4O35137 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Alx4O35137 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Alx4O35137 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alx4O35137 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Alx4O35137 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Alx4O35137 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.29□□□□□ -0.6
Alx4O35137 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Alx4O35137 Gm28631-201ENSMUST00000190740 334 ntBASIC11.29□□□□□ -0.6
Alx4O35137 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.29□□□□□ -0.6
Alx4O35137 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.29□□□□□ -0.6
Alx4O35137 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Alx4O35137 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.29□□□□□ -0.6
Alx4O35137 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alx4O35137 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Alx4O35137 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alx4O35137 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alx4O35137 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Alx4O35137 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.29□□□□□ -0.6
Alx4O35137 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.29□□□□□ -0.6
Alx4O35137 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.29□□□□□ -0.6
Alx4O35137 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Alx4O35137 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Alx4O35137 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Alx4O35137 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Alx4O35137 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Alx4O35137 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.28□□□□□ -0.6
Alx4O35137 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
Alx4O35137 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.28□□□□□ -0.6
Alx4O35137 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.28□□□□□ -0.6
Alx4O35137 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Alx4O35137 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Alx4O35137 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Gm23363-201ENSMUST00000175024 79 ntBASIC11.28□□□□□ -0.6
Alx4O35137 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Alx4O35137 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.28□□□□□ -0.6
Alx4O35137 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.28□□□□□ -0.6
Alx4O35137 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.28□□□□□ -0.6
Alx4O35137 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.28□□□□□ -0.6
Alx4O35137 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.28□□□□□ -0.6
Alx4O35137 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Alx4O35137 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms