Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 Gm42937-201ENSMUST00000197360 752 ntBASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Gm24845-201ENSMUST00000158034 109 ntBASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Gm20482-202ENSMUST00000174729 825 ntBASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb9E9Q5G2 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Gm14832-201ENSMUST00000121289 322 ntBASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Gm17376-201ENSMUST00000166016 84 ntBASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb9E9Q5G2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Pcdhb9E9Q5G2 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhb9E9Q5G2 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.83□□□□□ -0.03
Pcdhb9E9Q5G2 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Pcdhb9E9Q5G2 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhb9E9Q5G2 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb9E9Q5G2 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb9E9Q5G2 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdhb9E9Q5G2 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb9E9Q5G2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb9E9Q5G2 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb9E9Q5G2 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhb9E9Q5G2 Gm11930-201ENSMUST00000117788 190 ntBASIC14.83□□□□□ -0.04
Pcdhb9E9Q5G2 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.83□□□□□ -0.04
Pcdhb9E9Q5G2 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms