Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm5640A3KG49 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm5640A3KG49 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm5640A3KG49 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gm5640A3KG49 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm5640A3KG49 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm5640A3KG49 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm5640A3KG49 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm5640A3KG49 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm5640A3KG49 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm5640A3KG49 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm5640A3KG49 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm5640A3KG49 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm5640A3KG49 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Gm5640A3KG49 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm5640A3KG49 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Gm5640A3KG49 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm5640A3KG49 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Gm5640A3KG49 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Gm5640A3KG49 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Gm5640A3KG49 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.82□□□□□ -0.36
Gm5640A3KG49 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.82□□□□□ -0.36
Gm5640A3KG49 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Gm43094-201ENSMUST00000196549 921 ntBASIC12.82□□□□□ -0.36
Gm5640A3KG49 Gm42599-201ENSMUST00000201308 469 ntBASIC12.82□□□□□ -0.36
Gm5640A3KG49 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.82□□□□□ -0.36
Gm5640A3KG49 Gm26315-201ENSMUST00000083890 321 ntBASIC12.82□□□□□ -0.36
Gm5640A3KG49 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm5640A3KG49 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm5640A3KG49 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm5640A3KG49 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Gm5640A3KG49 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Gm5640A3KG49 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Gm5640A3KG49 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm5640A3KG49 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Gm5640A3KG49 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm5640A3KG49 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm5640A3KG49 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm5640A3KG49 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm5640A3KG49 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Gm5640A3KG49 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm5640A3KG49 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm5640A3KG49 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm5640A3KG49 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.81□□□□□ -0.36
Gm5640A3KG49 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.81□□□□□ -0.36
Gm5640A3KG49 Gm26464-201ENSMUST00000157094 305 ntBASIC12.81□□□□□ -0.36
Gm5640A3KG49 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Gm5640A3KG49 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm5640A3KG49 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.81□□□□□ -0.36
Gm5640A3KG49 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.81□□□□□ -0.36
Gm5640A3KG49 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm5640A3KG49 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm5640A3KG49 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm5640A3KG49 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Gm5640A3KG49 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm5640A3KG49 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.81□□□□□ -0.36
Gm5640A3KG49 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm5640A3KG49 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm5640A3KG49 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm5640A3KG49 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm5640A3KG49 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Gm5640A3KG49 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms