Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav18A0A075B656 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav18A0A075B656 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Gm12091-201ENSMUST00000146791 830 ntBASIC10.37□□□□□ -0.75
Trav18A0A075B656 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Gm10576-201ENSMUST00000191927 825 ntBASIC10.37□□□□□ -0.75
Trav18A0A075B656 Gm44124-201ENSMUST00000204159 472 ntBASIC10.37□□□□□ -0.75
Trav18A0A075B656 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav18A0A075B656 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.37□□□□□ -0.75
Trav18A0A075B656 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav18A0A075B656 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav18A0A075B656 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav18A0A075B656 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.36□□□□□ -0.75
Trav18A0A075B656 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Gm18018-201ENSMUST00000198273 408 ntBASIC10.36□□□□□ -0.75
Trav18A0A075B656 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav18A0A075B656 AC150560.1-201ENSMUST00000227731 1187 ntBASIC10.36□□□□□ -0.75
Trav18A0A075B656 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trav18A0A075B656 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav18A0A075B656 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.35□□□□□ -0.75
Trav18A0A075B656 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.35□□□□□ -0.75
Trav18A0A075B656 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms