Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atp6ap1Q9R1Q9 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Atp6ap1Q9R1Q9 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Gm11591-201ENSMUST00000120063 702 ntBASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Gm12502-201ENSMUST00000120197 444 ntBASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Gm5370-201ENSMUST00000187187 574 ntBASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Snora73a-201ENSMUST00000082453 205 ntBASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Atp6ap1Q9R1Q9 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 Gm13492-201ENSMUST00000119772 665 ntBASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 Gm6222-202ENSMUST00000182143 629 ntBASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Atp6ap1Q9R1Q9 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Atp6ap1Q9R1Q9 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Atp6ap1Q9R1Q9 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Atp6ap1Q9R1Q9 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Atp6ap1Q9R1Q9 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Atp6ap1Q9R1Q9 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Atp6ap1Q9R1Q9 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atp6ap1Q9R1Q9 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atp6ap1Q9R1Q9 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atp6ap1Q9R1Q9 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atp6ap1Q9R1Q9 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atp6ap1Q9R1Q9 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Atp6ap1Q9R1Q9 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atp6ap1Q9R1Q9 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atp6ap1Q9R1Q9 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atp6ap1Q9R1Q9 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Atp6ap1Q9R1Q9 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Atp6ap1Q9R1Q9 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Atp6ap1Q9R1Q9 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms