Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm22018-201ENSMUST00000104357 131 ntBASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Gm12502-201ENSMUST00000120197 444 ntBASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Gm19184-201ENSMUST00000196798 928 ntBASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Gm8099-201ENSMUST00000200510 742 ntBASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.24□□□□□ -0.29
Chmp2aQ9DB34 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Gm13392-201ENSMUST00000117708 150 ntBASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Gm12291-201ENSMUST00000121627 311 ntBASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Snora73a-201ENSMUST00000082453 205 ntBASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chmp2aQ9DB34 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2aQ9DB34 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.22□□□□□ -0.29
Chmp2aQ9DB34 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2aQ9DB34 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2aQ9DB34 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.22□□□□□ -0.29
Chmp2aQ9DB34 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.22□□□□□ -0.29
Chmp2aQ9DB34 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Chmp2aQ9DB34 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Chmp2aQ9DB34 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2aQ9DB34 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2aQ9DB34 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.22□□□□□ -0.29
Chmp2aQ9DB34 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.22□□□□□ -0.29
Chmp2aQ9DB34 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.22□□□□□ -0.29
Chmp2aQ9DB34 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2aQ9DB34 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2aQ9DB34 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Chmp2aQ9DB34 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2aQ9DB34 Gm10478-201ENSMUST00000084451 396 ntBASIC13.22□□□□□ -0.29
Chmp2aQ9DB34 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2aQ9DB34 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2aQ9DB34 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2aQ9DB34 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2aQ9DB34 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.22□□□□□ -0.29
Chmp2aQ9DB34 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2aQ9DB34 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chmp2aQ9DB34 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chmp2aQ9DB34 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms