Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.12□□□□□ -0.63
Tmem54Q9D7S1 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tmem54Q9D7S1 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tmem54Q9D7S1 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Tmem54Q9D7S1 Gm22058-201ENSMUST00000083393 310 ntBASIC11.12□□□□□ -0.63
Tmem54Q9D7S1 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Tmem54Q9D7S1 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Tmem54Q9D7S1 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tmem54Q9D7S1 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.12□□□□□ -0.63
Tmem54Q9D7S1 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tmem54Q9D7S1 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tmem54Q9D7S1 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tmem54Q9D7S1 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tmem54Q9D7S1 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.12□□□□□ -0.63
Tmem54Q9D7S1 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tmem54Q9D7S1 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Mir1247-201ENSMUST00000116706 82 ntBASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Gm38158-201ENSMUST00000194617 339 ntBASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Gm42693-201ENSMUST00000196779 631 ntBASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Gm42627-201ENSMUST00000197347 224 ntBASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Gm43118-201ENSMUST00000199149 775 ntBASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Gm43630-201ENSMUST00000201550 776 ntBASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tmem54Q9D7S1 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Gm11793-201ENSMUST00000120433 981 ntBASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Gm11964-201ENSMUST00000120982 444 ntBASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Gm6013-201ENSMUST00000212264 699 ntBASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tmem54Q9D7S1 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms