Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc80Q9D0F1 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc80Q9D0F1 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc80Q9D0F1 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc80Q9D0F1 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Ndc80Q9D0F1 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc80Q9D0F1 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.93□□□□□ -0.34
Ndc80Q9D0F1 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ndc80Q9D0F1 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc80Q9D0F1 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ndc80Q9D0F1 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Gm16479-201ENSMUST00000121706 932 ntBASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Gm10146-201ENSMUST00000072739 309 ntBASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ndc80Q9D0F1 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Gm29127-201ENSMUST00000188304 517 ntBASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ndc80Q9D0F1 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ndc80Q9D0F1 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.9□□□□□ -0.34
Ndc80Q9D0F1 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc80Q9D0F1 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc80Q9D0F1 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.9□□□□□ -0.34
Ndc80Q9D0F1 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc80Q9D0F1 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Ndc80Q9D0F1 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Ndc80Q9D0F1 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc80Q9D0F1 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc80Q9D0F1 Gm26185-201ENSMUST00000157692 266 ntBASIC12.9□□□□□ -0.34
Ndc80Q9D0F1 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.9□□□□□ -0.34
Ndc80Q9D0F1 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.9□□□□□ -0.34
Ndc80Q9D0F1 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc80Q9D0F1 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc80Q9D0F1 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Ndc80Q9D0F1 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc80Q9D0F1 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc80Q9D0F1 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc80Q9D0F1 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc80Q9D0F1 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ndc80Q9D0F1 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms