Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smc3Q9CW03 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smc3Q9CW03 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smc3Q9CW03 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smc3Q9CW03 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Smc3Q9CW03 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Smc3Q9CW03 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smc3Q9CW03 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smc3Q9CW03 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Smc3Q9CW03 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smc3Q9CW03 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Smc3Q9CW03 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Smc3Q9CW03 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Smc3Q9CW03 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Gm43321-201ENSMUST00000198897 2409 ntBASIC14.88□□□□□ -0.03
Smc3Q9CW03 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Smc3Q9CW03 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.88□□□□□ -0.03
Smc3Q9CW03 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Gm8213-201ENSMUST00000118191 441 ntBASIC14.88□□□□□ -0.03
Smc3Q9CW03 Gm10156-201ENSMUST00000122364 462 ntBASIC14.88□□□□□ -0.03
Smc3Q9CW03 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Gm10576-201ENSMUST00000191927 825 ntBASIC14.88□□□□□ -0.03
Smc3Q9CW03 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Smc3Q9CW03 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.88□□□□□ -0.03
Smc3Q9CW03 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc3Q9CW03 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Smc3Q9CW03 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Pck2-205ENSMUST00000226352 2784 ntBASIC14.87□□□□□ -0.03
Smc3Q9CW03 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Gm16479-201ENSMUST00000121706 932 ntBASIC14.87□□□□□ -0.03
Smc3Q9CW03 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
Smc3Q9CW03 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Gm9630-201ENSMUST00000178304 885 ntBASIC14.87□□□□□ -0.03
Smc3Q9CW03 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.87□□□□□ -0.03
Smc3Q9CW03 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.87□□□□□ -0.03
Smc3Q9CW03 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.87□□□□□ -0.03
Smc3Q9CW03 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.87□□□□□ -0.03
Smc3Q9CW03 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.87□□□□□ -0.03
Smc3Q9CW03 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Smc3Q9CW03 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Smc3Q9CW03 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms