Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Gm13875-201ENSMUST00000120162 282 ntBASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Gm5904-201ENSMUST00000210286 865 ntBASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Otud1Q9CUB6 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Gm13350-201ENSMUST00000120519 479 ntBASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Gm13813-201ENSMUST00000120998 787 ntBASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Gm38341-201ENSMUST00000195357 515 ntBASIC12.05□□□□□ -0.48
Otud1Q9CUB6 CT025561.1-201ENSMUST00000214972 674 ntBASIC12.05□□□□□ -0.48
Otud1Q9CUB6 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Morn2-202ENSMUST00000227729 656 ntBASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Otud1Q9CUB6 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.04□□□□□ -0.48
Otud1Q9CUB6 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Gm14201-201ENSMUST00000117627 289 ntBASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Otud1Q9CUB6 Gm16296-201ENSMUST00000159905 325 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms