Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim16Q99PP9 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Gm11978-201ENSMUST00000122315 466 ntBASIC12.42□□□□□ -0.42
Trim16Q99PP9 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.42□□□□□ -0.42
Trim16Q99PP9 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim16Q99PP9 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Gm6091-201ENSMUST00000098307 165 ntBASIC12.42□□□□□ -0.42
Trim16Q99PP9 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim16Q99PP9 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim16Q99PP9 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim16Q99PP9 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim16Q99PP9 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim16Q99PP9 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim16Q99PP9 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim16Q99PP9 Gm11618-201ENSMUST00000117946 267 ntBASIC12.41□□□□□ -0.42
Trim16Q99PP9 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim16Q99PP9 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim16Q99PP9 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim16Q99PP9 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim16Q99PP9 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim16Q99PP9 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim16Q99PP9 Gm27847-201ENSMUST00000183711 107 ntBASIC12.41□□□□□ -0.42
Trim16Q99PP9 Gm27375-201ENSMUST00000183799 107 ntBASIC12.41□□□□□ -0.42
Trim16Q99PP9 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim16Q99PP9 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.41□□□□□ -0.42
Trim16Q99PP9 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Trim16Q99PP9 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim16Q99PP9 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim16Q99PP9 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trim16Q99PP9 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim16Q99PP9 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim16Q99PP9 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim16Q99PP9 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim16Q99PP9 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.41□□□□□ -0.42
Trim16Q99PP9 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.41□□□□□ -0.42
Trim16Q99PP9 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.41□□□□□ -0.42
Trim16Q99PP9 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim16Q99PP9 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim16Q99PP9 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim16Q99PP9 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trim16Q99PP9 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Gm12203-201ENSMUST00000118235 598 ntBASIC12.4□□□□□ -0.42
Trim16Q99PP9 Gm12209-201ENSMUST00000120089 596 ntBASIC12.4□□□□□ -0.42
Trim16Q99PP9 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.4□□□□□ -0.42
Trim16Q99PP9 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim16Q99PP9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.4□□□□□ -0.42
Trim16Q99PP9 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim16Q99PP9 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim16Q99PP9 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms