Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Msh4Q99MT2 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msh4Q99MT2 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Msh4Q99MT2 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msh4Q99MT2 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msh4Q99MT2 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msh4Q99MT2 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.37□□□□□ -0.43
Msh4Q99MT2 Gm7029-201ENSMUST00000173226 450 ntBASIC12.37□□□□□ -0.43
Msh4Q99MT2 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Msh4Q99MT2 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Msh4Q99MT2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msh4Q99MT2 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Msh4Q99MT2 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.37□□□□□ -0.43
Msh4Q99MT2 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Msh4Q99MT2 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msh4Q99MT2 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Msh4Q99MT2 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msh4Q99MT2 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.37□□□□□ -0.43
Msh4Q99MT2 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msh4Q99MT2 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Msh4Q99MT2 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Msh4Q99MT2 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Msh4Q99MT2 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.37□□□□□ -0.43
Msh4Q99MT2 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msh4Q99MT2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msh4Q99MT2 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msh4Q99MT2 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Msh4Q99MT2 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msh4Q99MT2 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Msh4Q99MT2 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.36□□□□□ -0.43
Msh4Q99MT2 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Gm13392-201ENSMUST00000117708 150 ntBASIC12.36□□□□□ -0.43
Msh4Q99MT2 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Gm16479-201ENSMUST00000121706 932 ntBASIC12.36□□□□□ -0.43
Msh4Q99MT2 Gm11978-201ENSMUST00000122315 466 ntBASIC12.36□□□□□ -0.43
Msh4Q99MT2 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Gm2231-201ENSMUST00000125661 612 ntBASIC12.36□□□□□ -0.43
Msh4Q99MT2 Gm17420-201ENSMUST00000164753 153 ntBASIC12.36□□□□□ -0.43
Msh4Q99MT2 Gm26927-201ENSMUST00000182385 965 ntBASIC12.36□□□□□ -0.43
Msh4Q99MT2 Gm27514-201ENSMUST00000183692 110 ntBASIC12.36□□□□□ -0.43
Msh4Q99MT2 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.36□□□□□ -0.43
Msh4Q99MT2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msh4Q99MT2 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.36□□□□□ -0.43
Msh4Q99MT2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.35□□□□□ -0.43
Msh4Q99MT2 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Gm23931-201ENSMUST00000103842 109 ntBASIC12.35□□□□□ -0.43
Msh4Q99MT2 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Msh4Q99MT2 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms