Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tlr3Q99MB1 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Tlr3Q99MB1 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Tlr3Q99MB1 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tlr3Q99MB1 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tlr3Q99MB1 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Gm16296-201ENSMUST00000159905 325 ntBASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Gm38002-201ENSMUST00000193255 180 ntBASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Gm42627-201ENSMUST00000197347 224 ntBASIC13.62□□□□□ -0.23
Tlr3Q99MB1 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Tlr3Q99MB1 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.61□□□□□ -0.23
Tlr3Q99MB1 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Gm38092-201ENSMUST00000195600 653 ntBASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Gm44364-201ENSMUST00000198368 141 ntBASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Gm19309-201ENSMUST00000218295 205 ntBASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Gm24526-201ENSMUST00000082921 158 ntBASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Tlr3Q99MB1 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms