Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.18□□□□□ -0.3
Pcdhb1Q91Y08 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhb1Q91Y08 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pcdhb1Q91Y08 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb1Q91Y08 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms