Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Gm13813-201ENSMUST00000120998 787 ntBASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Mir1894-201ENSMUST00000122802 81 ntBASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Gm6244-201ENSMUST00000178732 841 ntBASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Gm6266-201ENSMUST00000203844 806 ntBASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Gm18062-201ENSMUST00000208020 547 ntBASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Gm18055-201ENSMUST00000208254 547 ntBASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Gm37648-201ENSMUST00000192072 2563 ntBASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdhga11Q91XY8 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Gm10156-201ENSMUST00000122364 462 ntBASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdhga11Q91XY8 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms