Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Pcdhga3Q91XY5 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Pcdhga3Q91XY5 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Pcdhga3Q91XY5 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Gm10012-201ENSMUST00000078252 192 ntBASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhga3Q91XY5 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Gm7063-201ENSMUST00000186840 981 ntBASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Gm37922-201ENSMUST00000195596 455 ntBASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhga3Q91XY5 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhga3Q91XY5 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms