Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.56□□□□□ -0.4
Vsx1Q91V10 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.56□□□□□ -0.4
Vsx1Q91V10 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Gm9062-201ENSMUST00000117712 727 ntBASIC12.55□□□□□ -0.4
Vsx1Q91V10 Gm15131-201ENSMUST00000119124 595 ntBASIC12.55□□□□□ -0.4
Vsx1Q91V10 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Gm17040-202ENSMUST00000170597 889 ntBASIC12.55□□□□□ -0.4
Vsx1Q91V10 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vsx1Q91V10 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.55□□□□□ -0.4
Vsx1Q91V10 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.55□□□□□ -0.4
Vsx1Q91V10 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Gzmn-202ENSMUST00000225535 989 ntBASIC12.55□□□□□ -0.4
Vsx1Q91V10 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.55□□□□□ -0.4
Vsx1Q91V10 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.55□□□□□ -0.4
Vsx1Q91V10 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vsx1Q91V10 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx1Q91V10 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.54□□□□□ -0.4
Vsx1Q91V10 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Vsx1Q91V10 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Gm13296-201ENSMUST00000117854 997 ntBASIC12.54□□□□□ -0.4
Vsx1Q91V10 Gm12058-201ENSMUST00000118614 437 ntBASIC12.54□□□□□ -0.4
Vsx1Q91V10 Gm11667-201ENSMUST00000119828 486 ntBASIC12.54□□□□□ -0.4
Vsx1Q91V10 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.54□□□□□ -0.4
Vsx1Q91V10 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.54□□□□□ -0.4
Vsx1Q91V10 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.54□□□□□ -0.4
Vsx1Q91V10 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Vsx1Q91V10 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vsx1Q91V10 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms