Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Gm11814-201ENSMUST00000119515 929 ntBASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Gm17208-201ENSMUST00000168388 535 ntBASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Gm24196-201ENSMUST00000179161 110 ntBASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Gm10146-201ENSMUST00000072739 309 ntBASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Gm10012-201ENSMUST00000078252 192 ntBASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.63□□□□□ -0.71
H1fooQ8VIK3 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Gm11637-201ENSMUST00000120601 592 ntBASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Gm22331-201ENSMUST00000158066 136 ntBASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Gm23363-201ENSMUST00000175024 79 ntBASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Gm27839-201ENSMUST00000184242 106 ntBASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.62□□□□□ -0.71
H1fooQ8VIK3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
H1fooQ8VIK3 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
H1fooQ8VIK3 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
H1fooQ8VIK3 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.61□□□□□ -0.71
H1fooQ8VIK3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.61□□□□□ -0.71
H1fooQ8VIK3 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
H1fooQ8VIK3 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
H1fooQ8VIK3 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
H1fooQ8VIK3 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.61□□□□□ -0.71
H1fooQ8VIK3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
H1fooQ8VIK3 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
H1fooQ8VIK3 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
H1fooQ8VIK3 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
H1fooQ8VIK3 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
H1fooQ8VIK3 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms