Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
Rfwd3Q8CIK8 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Rfwd3Q8CIK8 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Rfwd3Q8CIK8 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Gm8099-201ENSMUST00000200510 742 ntBASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Rfwd3Q8CIK8 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Gm14704-201ENSMUST00000120300 874 ntBASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rfwd3Q8CIK8 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Rfwd3Q8CIK8 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms