Protein–RNA interactions for Protein: Q8CEE7

Rdh13, Retinol dehydrogenase 13, mousemouse

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh13Q8CEE7 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rdh13Q8CEE7 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rdh13Q8CEE7 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rdh13Q8CEE7 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rdh13Q8CEE7 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rdh13Q8CEE7 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rdh13Q8CEE7 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rdh13Q8CEE7 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rdh13Q8CEE7 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rdh13Q8CEE7 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Rdh13Q8CEE7 Cog3-203ENSMUST00000227473 4197 ntBASIC12.33□□□□□ -0.44
Rdh13Q8CEE7 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Gm28911-201ENSMUST00000188837 117 ntBASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Pck2-205ENSMUST00000226352 2784 ntBASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rdh13Q8CEE7 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Gm27701-201ENSMUST00000184498 110 ntBASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rdh13Q8CEE7 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.3□□□□□ -0.44
Rdh13Q8CEE7 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rdh13Q8CEE7 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rdh13Q8CEE7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rdh13Q8CEE7 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.3□□□□□ -0.44
Rdh13Q8CEE7 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rdh13Q8CEE7 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Rdh13Q8CEE7 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rdh13Q8CEE7 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rdh13Q8CEE7 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Rdh13Q8CEE7 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rdh13Q8CEE7 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rdh13Q8CEE7 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rdh13Q8CEE7 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rdh13Q8CEE7 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rdh13Q8CEE7 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms