Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SynpoQ8CC35 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
SynpoQ8CC35 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.3□□□□□ -0.44
SynpoQ8CC35 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SynpoQ8CC35 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SynpoQ8CC35 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SynpoQ8CC35 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.3□□□□□ -0.44
SynpoQ8CC35 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SynpoQ8CC35 Mir686-201ENSMUST00000102174 109 ntBASIC12.3□□□□□ -0.44
SynpoQ8CC35 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SynpoQ8CC35 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.3□□□□□ -0.44
SynpoQ8CC35 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SynpoQ8CC35 Gm44069-201ENSMUST00000204898 506 ntBASIC12.3□□□□□ -0.44
SynpoQ8CC35 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SynpoQ8CC35 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.3□□□□□ -0.44
SynpoQ8CC35 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.3□□□□□ -0.44
SynpoQ8CC35 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SynpoQ8CC35 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SynpoQ8CC35 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SynpoQ8CC35 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SynpoQ8CC35 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SynpoQ8CC35 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SynpoQ8CC35 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SynpoQ8CC35 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SynpoQ8CC35 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SynpoQ8CC35 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SynpoQ8CC35 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SynpoQ8CC35 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SynpoQ8CC35 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SynpoQ8CC35 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SynpoQ8CC35 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SynpoQ8CC35 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Mir874-201ENSMUST00000104769 76 ntBASIC12.29□□□□□ -0.44
SynpoQ8CC35 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Gm2231-201ENSMUST00000125661 612 ntBASIC12.29□□□□□ -0.44
SynpoQ8CC35 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SynpoQ8CC35 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Gm42627-201ENSMUST00000197347 224 ntBASIC12.29□□□□□ -0.44
SynpoQ8CC35 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SynpoQ8CC35 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.29□□□□□ -0.44
SynpoQ8CC35 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.29□□□□□ -0.44
SynpoQ8CC35 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SynpoQ8CC35 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SynpoQ8CC35 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SynpoQ8CC35 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SynpoQ8CC35 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SynpoQ8CC35 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SynpoQ8CC35 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SynpoQ8CC35 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SynpoQ8CC35 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SynpoQ8CC35 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
SynpoQ8CC35 Gm13123-201ENSMUST00000122173 492 ntBASIC12.28□□□□□ -0.44
SynpoQ8CC35 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.28□□□□□ -0.44
SynpoQ8CC35 Gm19309-201ENSMUST00000218295 205 ntBASIC12.28□□□□□ -0.44
SynpoQ8CC35 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SynpoQ8CC35 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.28□□□□□ -0.44
SynpoQ8CC35 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.28□□□□□ -0.44
SynpoQ8CC35 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SynpoQ8CC35 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SynpoQ8CC35 Gm9823-201ENSMUST00000051212 327 ntBASIC12.28□□□□□ -0.44
SynpoQ8CC35 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SynpoQ8CC35 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.28□□□□□ -0.44
SynpoQ8CC35 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SynpoQ8CC35 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SynpoQ8CC35 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SynpoQ8CC35 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SynpoQ8CC35 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SynpoQ8CC35 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SynpoQ8CC35 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SynpoQ8CC35 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.27□□□□□ -0.44
SynpoQ8CC35 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.27□□□□□ -0.44
SynpoQ8CC35 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms