Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Nup54Q8BTS4 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Gm14723-201ENSMUST00000118686 215 ntBASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Gm13315-201ENSMUST00000120376 991 ntBASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Gm11597-201ENSMUST00000121423 964 ntBASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Gm2991-201ENSMUST00000173338 480 ntBASIC12.97□□□□□ -0.33
Nup54Q8BTS4 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.97□□□□□ -0.33
Nup54Q8BTS4 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Rmrp-201ENSMUST00000157463 271 ntBASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Gm3961-201ENSMUST00000204425 994 ntBASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Gm5950-201ENSMUST00000213337 772 ntBASIC12.96□□□□□ -0.33
Nup54Q8BTS4 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.96□□□□□ -0.33
Nup54Q8BTS4 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nup54Q8BTS4 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup54Q8BTS4 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Nup54Q8BTS4 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup54Q8BTS4 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup54Q8BTS4 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup54Q8BTS4 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup54Q8BTS4 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup54Q8BTS4 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nup54Q8BTS4 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms