Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.62□□□□□ -0.23
Nop53Q8BK35 Gm2495-201ENSMUST00000191160 466 ntBASIC13.62□□□□□ -0.23
Nop53Q8BK35 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nop53Q8BK35 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC13.62□□□□□ -0.23
Nop53Q8BK35 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nop53Q8BK35 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nop53Q8BK35 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nop53Q8BK35 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nop53Q8BK35 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nop53Q8BK35 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nop53Q8BK35 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nop53Q8BK35 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nop53Q8BK35 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Nop53Q8BK35 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nop53Q8BK35 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nop53Q8BK35 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.62□□□□□ -0.23
Nop53Q8BK35 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nop53Q8BK35 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nop53Q8BK35 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nop53Q8BK35 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nop53Q8BK35 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nop53Q8BK35 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nop53Q8BK35 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nop53Q8BK35 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nop53Q8BK35 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nop53Q8BK35 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nop53Q8BK35 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nop53Q8BK35 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nop53Q8BK35 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.61□□□□□ -0.23
Nop53Q8BK35 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Gm13829-201ENSMUST00000119600 138 ntBASIC13.61□□□□□ -0.23
Nop53Q8BK35 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Gm20614-201ENSMUST00000177106 632 ntBASIC13.61□□□□□ -0.23
Nop53Q8BK35 Gm27892-201ENSMUST00000185017 106 ntBASIC13.61□□□□□ -0.23
Nop53Q8BK35 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.61□□□□□ -0.23
Nop53Q8BK35 Gm8463-201ENSMUST00000208573 613 ntBASIC13.61□□□□□ -0.23
Nop53Q8BK35 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nop53Q8BK35 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.6□□□□□ -0.23
Nop53Q8BK35 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nop53Q8BK35 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nop53Q8BK35 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nop53Q8BK35 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
Nop53Q8BK35 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.6□□□□□ -0.23
Nop53Q8BK35 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nop53Q8BK35 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.6□□□□□ -0.23
Nop53Q8BK35 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nop53Q8BK35 Gm12849-201ENSMUST00000120013 739 ntBASIC13.6□□□□□ -0.23
Nop53Q8BK35 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.6□□□□□ -0.23
Nop53Q8BK35 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nop53Q8BK35 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.6□□□□□ -0.23
Nop53Q8BK35 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nop53Q8BK35 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.6□□□□□ -0.23
Nop53Q8BK35 Gm6266-201ENSMUST00000203844 806 ntBASIC13.6□□□□□ -0.23
Nop53Q8BK35 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nop53Q8BK35 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.6□□□□□ -0.23
Nop53Q8BK35 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.6□□□□□ -0.23
Nop53Q8BK35 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nop53Q8BK35 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nop53Q8BK35 Gm18473-201ENSMUST00000220543 868 ntBASIC13.6□□□□□ -0.23
Nop53Q8BK35 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.6□□□□□ -0.23
Nop53Q8BK35 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nop53Q8BK35 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nop53Q8BK35 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nop53Q8BK35 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nop53Q8BK35 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nop53Q8BK35 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Nop53Q8BK35 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nop53Q8BK35 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nop53Q8BK35 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nop53Q8BK35 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms