Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clrn3Q8BHH8 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clrn3Q8BHH8 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clrn3Q8BHH8 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clrn3Q8BHH8 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clrn3Q8BHH8 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Clrn3Q8BHH8 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.96□□□□□ -0.49
Clrn3Q8BHH8 Gm13123-201ENSMUST00000122173 492 ntBASIC11.96□□□□□ -0.49
Clrn3Q8BHH8 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.96□□□□□ -0.49
Clrn3Q8BHH8 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clrn3Q8BHH8 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.96□□□□□ -0.49
Clrn3Q8BHH8 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Clrn3Q8BHH8 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.96□□□□□ -0.49
Clrn3Q8BHH8 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.96□□□□□ -0.49
Clrn3Q8BHH8 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clrn3Q8BHH8 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Clrn3Q8BHH8 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Clrn3Q8BHH8 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clrn3Q8BHH8 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Clrn3Q8BHH8 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Clrn3Q8BHH8 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Clrn3Q8BHH8 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Clrn3Q8BHH8 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Clrn3Q8BHH8 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Clrn3Q8BHH8 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Clrn3Q8BHH8 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Clrn3Q8BHH8 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Clrn3Q8BHH8 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Clrn3Q8BHH8 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Clrn3Q8BHH8 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Clrn3Q8BHH8 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Clrn3Q8BHH8 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Clrn3Q8BHH8 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Clrn3Q8BHH8 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Clrn3Q8BHH8 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Gm4984-201ENSMUST00000115987 360 ntBASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Gm7561-201ENSMUST00000211203 886 ntBASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn3Q8BHH8 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.94□□□□□ -0.5
Clrn3Q8BHH8 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms