Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shank2Q80Z38 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shank2Q80Z38 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Shank2Q80Z38 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Shank2Q80Z38 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shank2Q80Z38 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shank2Q80Z38 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shank2Q80Z38 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Shank2Q80Z38 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shank2Q80Z38 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shank2Q80Z38 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Shank2Q80Z38 Gm25076-201ENSMUST00000104098 132 ntBASIC16.07■□□□□ 0.16
Shank2Q80Z38 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC16.07■□□□□ 0.16
Shank2Q80Z38 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Shank2Q80Z38 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Shank2Q80Z38 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC16.07■□□□□ 0.16
Shank2Q80Z38 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shank2Q80Z38 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shank2Q80Z38 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shank2Q80Z38 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Shank2Q80Z38 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shank2Q80Z38 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shank2Q80Z38 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Shank2Q80Z38 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC16.07■□□□□ 0.16
Shank2Q80Z38 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Shank2Q80Z38 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shank2Q80Z38 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shank2Q80Z38 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Shank2Q80Z38 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shank2Q80Z38 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shank2Q80Z38 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shank2Q80Z38 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC16.06■□□□□ 0.16
Shank2Q80Z38 Gm13549-201ENSMUST00000118339 796 ntBASIC16.06■□□□□ 0.16
Shank2Q80Z38 Gm12856-201ENSMUST00000119471 1293 ntBASIC16.06■□□□□ 0.16
Shank2Q80Z38 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC16.06■□□□□ 0.16
Shank2Q80Z38 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Shank2Q80Z38 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC16.06■□□□□ 0.16
Shank2Q80Z38 Gm15744-201ENSMUST00000161734 213 ntBASIC16.06■□□□□ 0.16
Shank2Q80Z38 Gm3551-201ENSMUST00000190750 664 ntBASIC16.06■□□□□ 0.16
Shank2Q80Z38 Gm45575-201ENSMUST00000210283 548 ntBASIC16.06■□□□□ 0.16
Shank2Q80Z38 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC16.06■□□□□ 0.16
Shank2Q80Z38 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Shank2Q80Z38 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shank2Q80Z38 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Shank2Q80Z38 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shank2Q80Z38 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shank2Q80Z38 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shank2Q80Z38 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shank2Q80Z38 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Shank2Q80Z38 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Shank2Q80Z38 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Shank2Q80Z38 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shank2Q80Z38 Gm5939-201ENSMUST00000119613 2874 ntBASIC16.06■□□□□ 0.16
Shank2Q80Z38 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shank2Q80Z38 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Shank2Q80Z38 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Shank2Q80Z38 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Shank2Q80Z38 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shank2Q80Z38 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shank2Q80Z38 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Shank2Q80Z38 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shank2Q80Z38 Gm22920-201ENSMUST00000102175 109 ntBASIC16.05■□□□□ 0.16
Shank2Q80Z38 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Shank2Q80Z38 Gm11511-201ENSMUST00000118146 540 ntBASIC16.05■□□□□ 0.16
Shank2Q80Z38 Gm15566-201ENSMUST00000121130 590 ntBASIC16.05■□□□□ 0.16
Shank2Q80Z38 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC16.05■□□□□ 0.16
Shank2Q80Z38 Gm5298-201ENSMUST00000201122 892 ntBASIC16.05■□□□□ 0.16
Shank2Q80Z38 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Shank2Q80Z38 Mt1-202ENSMUST00000211807 1085 ntBASIC16.05■□□□□ 0.16
Shank2Q80Z38 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Shank2Q80Z38 AC168279.1-201ENSMUST00000214611 382 ntBASIC16.05■□□□□ 0.16
Shank2Q80Z38 Gm9797-202ENSMUST00000218003 294 ntBASIC16.05■□□□□ 0.16
Shank2Q80Z38 AC115122.1-201ENSMUST00000224850 1040 ntBASIC16.05■□□□□ 0.16
Shank2Q80Z38 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Shank2Q80Z38 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shank2Q80Z38 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shank2Q80Z38 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shank2Q80Z38 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Shank2Q80Z38 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shank2Q80Z38 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shank2Q80Z38 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Shank2Q80Z38 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shank2Q80Z38 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shank2Q80Z38 AC122314.1-201ENSMUST00000223056 2239 ntBASIC16.05■□□□□ 0.16
Shank2Q80Z38 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shank2Q80Z38 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shank2Q80Z38 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shank2Q80Z38 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Shank2Q80Z38 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shank2Q80Z38 Gm6198-201ENSMUST00000191337 2929 ntBASIC16.05■□□□□ 0.16
Shank2Q80Z38 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shank2Q80Z38 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shank2Q80Z38 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shank2Q80Z38 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Shank2Q80Z38 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shank2Q80Z38 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shank2Q80Z38 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
Shank2Q80Z38 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shank2Q80Z38 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shank2Q80Z38 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms