Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Gm13736-201ENSMUST00000119272 253 ntBASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Gm11597-201ENSMUST00000121423 964 ntBASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Gm44405-201ENSMUST00000198952 126 ntBASIC12.66□□□□□ -0.38
Rpp38Q80UU2 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpp38Q80UU2 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Gm13315-201ENSMUST00000120376 991 ntBASIC12.65□□□□□ -0.38
Rpp38Q80UU2 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Gm19184-201ENSMUST00000196798 928 ntBASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpp38Q80UU2 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rpp38Q80UU2 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rpp38Q80UU2 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rpp38Q80UU2 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpp38Q80UU2 Gm9022-201ENSMUST00000182482 992 ntBASIC12.64□□□□□ -0.39
Rpp38Q80UU2 AY702102-202ENSMUST00000194651 1173 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms