Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scaf4Q6PFF0 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Gm18307-201ENSMUST00000206864 949 ntBASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Gm16372-201ENSMUST00000073088 450 ntBASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scaf4Q6PFF0 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Gm14921-201ENSMUST00000118643 908 ntBASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Gm37935-201ENSMUST00000192012 982 ntBASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Gm19220-201ENSMUST00000222682 803 ntBASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.48□□□□□ -0.41
Scaf4Q6PFF0 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Gm6152-201ENSMUST00000151704 340 ntBASIC12.47□□□□□ -0.41
Scaf4Q6PFF0 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms