Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tpm4Q6IRU2 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tpm4Q6IRU2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Gm14350-201ENSMUST00000116642 640 ntBASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Gm11978-201ENSMUST00000122315 466 ntBASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Mir6392-201ENSMUST00000184924 108 ntBASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Mir7654-201ENSMUST00000185082 70 ntBASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Gm44069-201ENSMUST00000204898 506 ntBASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tpm4Q6IRU2 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm4Q6IRU2 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm4Q6IRU2 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm4Q6IRU2 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm4Q6IRU2 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm4Q6IRU2 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm4Q6IRU2 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm4Q6IRU2 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm4Q6IRU2 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm4Q6IRU2 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm4Q6IRU2 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Tpm4Q6IRU2 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm4Q6IRU2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tpm4Q6IRU2 Gm5687-201ENSMUST00000118252 640 ntBASIC14.16□□□□□ -0.14
Tpm4Q6IRU2 Gm6152-201ENSMUST00000151704 340 ntBASIC14.16□□□□□ -0.14
Tpm4Q6IRU2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.16□□□□□ -0.14
Tpm4Q6IRU2 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms