Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt39Q6IFX4 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt39Q6IFX4 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt39Q6IFX4 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Krt39Q6IFX4 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14□□□□□ -0.17
Krt39Q6IFX4 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt39Q6IFX4 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC14□□□□□ -0.17
Krt39Q6IFX4 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Krt39Q6IFX4 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14□□□□□ -0.17
Krt39Q6IFX4 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt39Q6IFX4 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14□□□□□ -0.17
Krt39Q6IFX4 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Krt39Q6IFX4 Gm11478-201ENSMUST00000117851 599 ntBASIC14□□□□□ -0.17
Krt39Q6IFX4 Gm11618-201ENSMUST00000117946 267 ntBASIC14□□□□□ -0.17
Krt39Q6IFX4 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14□□□□□ -0.17
Krt39Q6IFX4 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14□□□□□ -0.17
Krt39Q6IFX4 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt39Q6IFX4 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14□□□□□ -0.17
Krt39Q6IFX4 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14□□□□□ -0.17
Krt39Q6IFX4 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14□□□□□ -0.17
Krt39Q6IFX4 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14□□□□□ -0.17
Krt39Q6IFX4 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Krt39Q6IFX4 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14□□□□□ -0.17
Krt39Q6IFX4 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt39Q6IFX4 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14□□□□□ -0.17
Krt39Q6IFX4 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt39Q6IFX4 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt39Q6IFX4 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14□□□□□ -0.17
Krt39Q6IFX4 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14□□□□□ -0.17
Krt39Q6IFX4 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Krt39Q6IFX4 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Krt39Q6IFX4 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14□□□□□ -0.17
Krt39Q6IFX4 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Krt39Q6IFX4 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Gm9630-201ENSMUST00000178304 885 ntBASIC13.99□□□□□ -0.17
Krt39Q6IFX4 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt39Q6IFX4 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.98□□□□□ -0.17
Krt39Q6IFX4 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Krt39Q6IFX4 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt39Q6IFX4 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt39Q6IFX4 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt39Q6IFX4 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt39Q6IFX4 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Krt39Q6IFX4 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.98□□□□□ -0.17
Krt39Q6IFX4 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Krt39Q6IFX4 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt39Q6IFX4 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt39Q6IFX4 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Krt39Q6IFX4 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt39Q6IFX4 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt39Q6IFX4 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt39Q6IFX4 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Krt39Q6IFX4 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Krt39Q6IFX4 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.98□□□□□ -0.17
Krt39Q6IFX4 Proscos-202ENSMUST00000178990 666 ntBASIC13.98□□□□□ -0.17
Krt39Q6IFX4 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Krt39Q6IFX4 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Krt39Q6IFX4 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt39Q6IFX4 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt39Q6IFX4 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
Krt39Q6IFX4 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt39Q6IFX4 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt39Q6IFX4 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Krt39Q6IFX4 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.97□□□□□ -0.17
Krt39Q6IFX4 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms