Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scaf8Q6DID3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Scaf8Q6DID3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scaf8Q6DID3 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Scaf8Q6DID3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Gm15074-201ENSMUST00000117603 936 ntBASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Gm15573-201ENSMUST00000119487 540 ntBASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Gm12291-201ENSMUST00000121627 311 ntBASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Gm42937-201ENSMUST00000197360 752 ntBASIC14.84□□□□□ -0.03
Scaf8Q6DID3 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Gm10076-201ENSMUST00000073238 384 ntBASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Scaf8Q6DID3 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Scaf8Q6DID3 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Scaf8Q6DID3 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Scaf8Q6DID3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Scaf8Q6DID3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Scaf8Q6DID3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.83□□□□□ -0.03
Scaf8Q6DID3 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Scaf8Q6DID3 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC14.83□□□□□ -0.03
Scaf8Q6DID3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Scaf8Q6DID3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Gm37905-201ENSMUST00000195310 341 ntBASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Gm34023-201ENSMUST00000195539 217 ntBASIC14.83□□□□□ -0.04
Scaf8Q6DID3 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Gm4797-201ENSMUST00000219075 1283 ntBASIC14.83□□□□□ -0.04
Scaf8Q6DID3 AC133602.1-201ENSMUST00000227510 509 ntBASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Gm9873-201ENSMUST00000063891 1097 ntBASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Scaf8Q6DID3 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scaf8Q6DID3 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.82□□□□□ -0.04
Scaf8Q6DID3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scaf8Q6DID3 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scaf8Q6DID3 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scaf8Q6DID3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Scaf8Q6DID3 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms