Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VclQ64727 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.5□□□□□ -0.41
VclQ64727 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
VclQ64727 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VclQ64727 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.5□□□□□ -0.41
VclQ64727 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.5□□□□□ -0.41
VclQ64727 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.5□□□□□ -0.41
VclQ64727 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.5□□□□□ -0.41
VclQ64727 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VclQ64727 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.5□□□□□ -0.41
VclQ64727 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VclQ64727 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
VclQ64727 Gm24526-201ENSMUST00000082921 158 ntBASIC12.5□□□□□ -0.41
VclQ64727 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.5□□□□□ -0.41
VclQ64727 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VclQ64727 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VclQ64727 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VclQ64727 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
VclQ64727 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.5□□□□□ -0.41
VclQ64727 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
VclQ64727 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
VclQ64727 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VclQ64727 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
VclQ64727 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VclQ64727 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VclQ64727 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
VclQ64727 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VclQ64727 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
VclQ64727 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VclQ64727 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VclQ64727 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VclQ64727 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
VclQ64727 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
VclQ64727 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
VclQ64727 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
VclQ64727 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.49□□□□□ -0.41
VclQ64727 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
VclQ64727 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.49□□□□□ -0.41
VclQ64727 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.49□□□□□ -0.41
VclQ64727 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
VclQ64727 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.49□□□□□ -0.41
VclQ64727 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Gm10434-201ENSMUST00000101158 471 ntBASIC12.49□□□□□ -0.41
VclQ64727 Snord83b-201ENSMUST00000104546 94 ntBASIC12.49□□□□□ -0.41
VclQ64727 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Gm13813-201ENSMUST00000120998 787 ntBASIC12.49□□□□□ -0.41
VclQ64727 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.49□□□□□ -0.41
VclQ64727 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.49□□□□□ -0.41
VclQ64727 Gm24548-201ENSMUST00000158650 108 ntBASIC12.49□□□□□ -0.41
VclQ64727 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Gm8738-201ENSMUST00000172606 329 ntBASIC12.49□□□□□ -0.41
VclQ64727 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.49□□□□□ -0.41
VclQ64727 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
VclQ64727 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.49□□□□□ -0.41
VclQ64727 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.49□□□□□ -0.41
VclQ64727 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.49□□□□□ -0.41
VclQ64727 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
VclQ64727 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
VclQ64727 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VclQ64727 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VclQ64727 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VclQ64727 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VclQ64727 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VclQ64727 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.48□□□□□ -0.41
VclQ64727 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VclQ64727 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.48□□□□□ -0.41
VclQ64727 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VclQ64727 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VclQ64727 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VclQ64727 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VclQ64727 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms