Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Gm9755-201ENSMUST00000032981 1356 ntBASIC9.17□□□□□ -0.94
Ndufa4Q62425 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Gm19078-201ENSMUST00000206311 727 ntBASIC9.17□□□□□ -0.94
Ndufa4Q62425 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ndufa4Q62425 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ndufa4Q62425 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Ndufa4Q62425 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Gm10040-201ENSMUST00000080726 1662 ntBASIC9.16□□□□□ -0.94
Ndufa4Q62425 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 AC156031.2-201ENSMUST00000213107 3310 ntBASIC9.16□□□□□ -0.94
Ndufa4Q62425 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC9.16□□□□□ -0.94
Ndufa4Q62425 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Map1b-203ENSMUST00000223725 2669 ntBASIC9.16□□□□□ -0.94
Ndufa4Q62425 AC160410.1-201ENSMUST00000219298 1972 ntBASIC9.16□□□□□ -0.94
Ndufa4Q62425 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Gm4875-201ENSMUST00000118257 786 ntBASIC9.16□□□□□ -0.94
Ndufa4Q62425 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Gm27525-201ENSMUST00000184465 107 ntBASIC9.16□□□□□ -0.94
Ndufa4Q62425 Gm27430-201ENSMUST00000184585 107 ntBASIC9.16□□□□□ -0.94
Ndufa4Q62425 Gm8000-201ENSMUST00000188378 592 ntBASIC9.16□□□□□ -0.94
Ndufa4Q62425 Gm44333-201ENSMUST00000197168 107 ntBASIC9.16□□□□□ -0.94
Ndufa4Q62425 Gm18916-201ENSMUST00000198264 1246 ntBASIC9.16□□□□□ -0.94
Ndufa4Q62425 Ighv8-10-201ENSMUST00000199579 358 ntBASIC9.16□□□□□ -0.94
Ndufa4Q62425 Gm42599-201ENSMUST00000201308 469 ntBASIC9.16□□□□□ -0.94
Ndufa4Q62425 Gm5312-201ENSMUST00000203728 547 ntBASIC9.16□□□□□ -0.94
Ndufa4Q62425 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Arhgef3-204ENSMUST00000225949 3198 ntBASIC9.16□□□□□ -0.94
Ndufa4Q62425 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Gm5648-201ENSMUST00000122244 1587 ntBASIC9.16□□□□□ -0.94
Ndufa4Q62425 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ndufa4Q62425 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ndufa4Q62425 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ndufa4Q62425 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms