Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 AC114008.2-201ENSMUST00000227699 1347 ntBASIC9.57□□□□□ -0.88
Foxc1Q61572 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC9.57□□□□□ -0.88
Foxc1Q61572 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Foxc1Q61572 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Gm42449-201ENSMUST00000200349 2258 ntBASIC9.57□□□□□ -0.88
Foxc1Q61572 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Foxc1Q61572 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Foxc1Q61572 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC9.57□□□□□ -0.88
Foxc1Q61572 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
Foxc1Q61572 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
Foxc1Q61572 Gm12928-201ENSMUST00000117115 573 ntBASIC9.57□□□□□ -0.88
Foxc1Q61572 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
Foxc1Q61572 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
Foxc1Q61572 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC9.57□□□□□ -0.88
Foxc1Q61572 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC9.57□□□□□ -0.88
Foxc1Q61572 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Foxc1Q61572 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Gm6098-201ENSMUST00000180234 330 ntBASIC9.57□□□□□ -0.88
Foxc1Q61572 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Foxc1Q61572 Gm2495-201ENSMUST00000191160 466 ntBASIC9.57□□□□□ -0.88
Foxc1Q61572 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC9.57□□□□□ -0.88
Foxc1Q61572 Gm43550-201ENSMUST00000200597 303 ntBASIC9.57□□□□□ -0.88
Foxc1Q61572 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC9.57□□□□□ -0.88
Foxc1Q61572 Gm6007-201ENSMUST00000208170 823 ntBASIC9.57□□□□□ -0.88
Foxc1Q61572 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Foxc1Q61572 AC153544.1-201ENSMUST00000217988 400 ntBASIC9.57□□□□□ -0.88
Foxc1Q61572 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC9.57□□□□□ -0.88
Foxc1Q61572 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 AC126043.1-201ENSMUST00000221304 1141 ntBASIC9.57□□□□□ -0.88
Foxc1Q61572 AC116589.4-201ENSMUST00000222390 216 ntBASIC9.57□□□□□ -0.88
Foxc1Q61572 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC9.57□□□□□ -0.88
Foxc1Q61572 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
Foxc1Q61572 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC9.57□□□□□ -0.88
Foxc1Q61572 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC9.57□□□□□ -0.88
Foxc1Q61572 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Foxc1Q61572 Olfr23-202ENSMUST00000214210 2527 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Foxc1Q61572 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Foxc1Q61572 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Foxc1Q61572 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Foxc1Q61572 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC9.56□□□□□ -0.88
Foxc1Q61572 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.56□□□□□ -0.88
Foxc1Q61572 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Foxc1Q61572 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Foxc1Q61572 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Foxc1Q61572 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Foxc1Q61572 Gm38055-201ENSMUST00000195353 2217 ntBASIC9.56□□□□□ -0.88
Foxc1Q61572 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Foxc1Q61572 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Foxc1Q61572 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Foxc1Q61572 Gm27194-201ENSMUST00000175753 2936 ntBASIC9.56□□□□□ -0.88
Foxc1Q61572 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Foxc1Q61572 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Foxc1Q61572 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Foxc1Q61572 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Foxc1Q61572 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Foxc1Q61572 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Foxc1Q61572 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Foxc1Q61572 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Foxc1Q61572 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Foxc1Q61572 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Foxc1Q61572 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Foxc1Q61572 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Foxc1Q61572 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Foxc1Q61572 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms