Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfaip3Q60769 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfaip3Q60769 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfaip3Q60769 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfaip3Q60769 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfaip3Q60769 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tnfaip3Q60769 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfaip3Q60769 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.96□□□□□ -0.49
Tnfaip3Q60769 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfaip3Q60769 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfaip3Q60769 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfaip3Q60769 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfaip3Q60769 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfaip3Q60769 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfaip3Q60769 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfaip3Q60769 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfaip3Q60769 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.96□□□□□ -0.49
Tnfaip3Q60769 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfaip3Q60769 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfaip3Q60769 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfaip3Q60769 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfaip3Q60769 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfaip3Q60769 Gm13813-201ENSMUST00000120998 787 ntBASIC11.96□□□□□ -0.49
Tnfaip3Q60769 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.96□□□□□ -0.49
Tnfaip3Q60769 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.96□□□□□ -0.49
Tnfaip3Q60769 Gm38092-201ENSMUST00000195600 653 ntBASIC11.96□□□□□ -0.49
Tnfaip3Q60769 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfaip3Q60769 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Tnfaip3Q60769 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfaip3Q60769 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfaip3Q60769 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tnfaip3Q60769 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfaip3Q60769 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfaip3Q60769 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.96□□□□□ -0.5
Tnfaip3Q60769 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfaip3Q60769 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
Tnfaip3Q60769 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Tnfaip3Q60769 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfaip3Q60769 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfaip3Q60769 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Tnfaip3Q60769 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Tnfaip3Q60769 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Tnfaip3Q60769 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.96□□□□□ -0.5
Tnfaip3Q60769 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Gm4986-201ENSMUST00000119731 549 ntBASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Gm13297-201ENSMUST00000120205 934 ntBASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Mir8109-201ENSMUST00000184375 117 ntBASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tnfaip3Q60769 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms