Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm3551-201ENSMUST00000190750 664 ntBASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.6□□□□□ -0.55
Spg11Q3UHA3 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Gm25053-201ENSMUST00000103982 133 ntBASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Gm25922-201ENSMUST00000104281 130 ntBASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Gm24679-201ENSMUST00000158762 111 ntBASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Gm16296-201ENSMUST00000159905 325 ntBASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Gm26875-201ENSMUST00000181006 950 ntBASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Gm25053-202ENSMUST00000199731 132 ntBASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Spg11Q3UHA3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Gm24954-201ENSMUST00000178831 110 ntBASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Spg11Q3UHA3 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Spg11Q3UHA3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Spg11Q3UHA3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.58□□□□□ -0.56
Spg11Q3UHA3 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.58□□□□□ -0.56
Spg11Q3UHA3 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.58□□□□□ -0.56
Spg11Q3UHA3 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.58□□□□□ -0.56
Spg11Q3UHA3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Spg11Q3UHA3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms