Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc4Q3TCX3 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc4Q3TCX3 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc4Q3TCX3 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc4Q3TCX3 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Khdc4Q3TCX3 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc4Q3TCX3 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc4Q3TCX3 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc4Q3TCX3 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc4Q3TCX3 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Khdc4Q3TCX3 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Khdc4Q3TCX3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc4Q3TCX3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc4Q3TCX3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Khdc4Q3TCX3 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc4Q3TCX3 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc4Q3TCX3 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc4Q3TCX3 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.11□□□□□ -0.47
Khdc4Q3TCX3 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Khdc4Q3TCX3 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Khdc4Q3TCX3 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Gm13297-201ENSMUST00000120205 934 ntBASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Gm11637-201ENSMUST00000120601 592 ntBASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Mospd4-201ENSMUST00000180618 576 ntBASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Khdc4Q3TCX3 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Gm4986-201ENSMUST00000119731 549 ntBASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Gm14381-201ENSMUST00000122105 414 ntBASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Gm12363-201ENSMUST00000122250 668 ntBASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Gm4768-201ENSMUST00000206199 686 ntBASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Gm6458-201ENSMUST00000211573 635 ntBASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.09□□□□□ -0.47
Khdc4Q3TCX3 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms