Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx3-2P97503 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx3-2P97503 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx3-2P97503 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx3-2P97503 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Nkx3-2P97503 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx3-2P97503 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.01□□□□□ -0.49
Nkx3-2P97503 Gm4986-201ENSMUST00000119731 549 ntBASIC12.01□□□□□ -0.49
Nkx3-2P97503 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.01□□□□□ -0.49
Nkx3-2P97503 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Gm43758-201ENSMUST00000199500 367 ntBASIC12.01□□□□□ -0.49
Nkx3-2P97503 Gm45865-201ENSMUST00000211815 945 ntBASIC12.01□□□□□ -0.49
Nkx3-2P97503 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx3-2P97503 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.01□□□□□ -0.49
Nkx3-2P97503 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Nkx3-2P97503 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Nkx3-2P97503 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Nkx3-2P97503 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Nkx3-2P97503 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nkx3-2P97503 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 Gm11222-201ENSMUST00000119005 738 ntBASIC12□□□□□ -0.49
Nkx3-2P97503 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12□□□□□ -0.49
Nkx3-2P97503 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nkx3-2P97503 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12□□□□□ -0.49
Nkx3-2P97503 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12□□□□□ -0.49
Nkx3-2P97503 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12□□□□□ -0.49
Nkx3-2P97503 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12□□□□□ -0.49
Nkx3-2P97503 Cts7-204ENSMUST00000225321 1257 ntBASIC12□□□□□ -0.49
Nkx3-2P97503 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Nkx3-2P97503 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Nkx3-2P97503 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nkx3-2P97503 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12□□□□□ -0.49
Nkx3-2P97503 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Nkx3-2P97503 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nkx3-2P97503 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nkx3-2P97503 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nkx3-2P97503 Gm10434-201ENSMUST00000101158 471 ntBASIC11.99□□□□□ -0.49
Nkx3-2P97503 Gm22323-201ENSMUST00000103832 109 ntBASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms