Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm15707-201ENSMUST00000118804 996 ntBASIC8.35□□□□□ -1.07
PrkdcP97313 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC8.35□□□□□ -1.07
PrkdcP97313 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC8.35□□□□□ -1.07
PrkdcP97313 Mir432-201ENSMUST00000157230 75 ntBASIC8.35□□□□□ -1.07
PrkdcP97313 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC8.35□□□□□ -1.07
PrkdcP97313 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Gm26670-202ENSMUST00000226862 340 ntBASIC8.35□□□□□ -1.07
PrkdcP97313 AC121357.1-201ENSMUST00000227365 608 ntBASIC8.35□□□□□ -1.07
PrkdcP97313 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
PrkdcP97313 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
PrkdcP97313 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC8.35□□□□□ -1.07
PrkdcP97313 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC8.35□□□□□ -1.07
PrkdcP97313 Ighv1-2-201ENSMUST00000195325 378 ntBASIC8.35□□□□□ -1.07
PrkdcP97313 Gm7504-201ENSMUST00000201449 424 ntBASIC8.35□□□□□ -1.07
PrkdcP97313 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
PrkdcP97313 Olfr584-201ENSMUST00000098210 964 ntBASIC8.35□□□□□ -1.07
PrkdcP97313 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC8.35□□□□□ -1.07
PrkdcP97313 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
PrkdcP97313 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
PrkdcP97313 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC8.34□□□□□ -1.07
PrkdcP97313 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
PrkdcP97313 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Gm42769-201ENSMUST00000198576 1659 ntBASIC8.34□□□□□ -1.07
PrkdcP97313 Gm44152-201ENSMUST00000205007 1691 ntBASIC8.34□□□□□ -1.07
PrkdcP97313 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
PrkdcP97313 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC8.34□□□□□ -1.07
PrkdcP97313 Gm25677-201ENSMUST00000174983 72 ntBASIC8.34□□□□□ -1.07
PrkdcP97313 Gm24809-201ENSMUST00000175318 271 ntBASIC8.34□□□□□ -1.07
PrkdcP97313 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC8.34□□□□□ -1.07
PrkdcP97313 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
PrkdcP97313 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC8.34□□□□□ -1.07
PrkdcP97313 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC8.34□□□□□ -1.07
PrkdcP97313 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
PrkdcP97313 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC8.34□□□□□ -1.07
PrkdcP97313 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC8.34□□□□□ -1.07
PrkdcP97313 Gm9673-201ENSMUST00000119287 781 ntBASIC8.34□□□□□ -1.07
PrkdcP97313 Gm14497-201ENSMUST00000119537 580 ntBASIC8.34□□□□□ -1.07
PrkdcP97313 Gm13204-201ENSMUST00000120110 821 ntBASIC8.34□□□□□ -1.07
PrkdcP97313 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC8.34□□□□□ -1.07
PrkdcP97313 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Gm22379-201ENSMUST00000157480 131 ntBASIC8.34□□□□□ -1.07
PrkdcP97313 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC8.34□□□□□ -1.07
PrkdcP97313 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
PrkdcP97313 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC8.34□□□□□ -1.07
PrkdcP97313 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC8.34□□□□□ -1.07
PrkdcP97313 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Gm7069-201ENSMUST00000182418 1008 ntBASIC8.34□□□□□ -1.07
PrkdcP97313 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC8.34□□□□□ -1.07
PrkdcP97313 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
PrkdcP97313 AC158392.3-201ENSMUST00000224271 1284 ntBASIC8.34□□□□□ -1.07
PrkdcP97313 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PrkdcP97313 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.08
PrkdcP97313 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
PrkdcP97313 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
PrkdcP97313 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
PrkdcP97313 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.08
PrkdcP97313 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
PrkdcP97313 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
PrkdcP97313 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PrkdcP97313 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC8.33□□□□□ -1.08
PrkdcP97313 Gm44814-201ENSMUST00000207018 434 ntBASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms