Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
Atf1P81269 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Atf1P81269 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Atf1P81269 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.98□□□□□ -0.65
Atf1P81269 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Atf1P81269 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Atf1P81269 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.98□□□□□ -0.65
Atf1P81269 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.98□□□□□ -0.65
Atf1P81269 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Atf1P81269 Gm10146-201ENSMUST00000072739 309 ntBASIC10.98□□□□□ -0.65
Atf1P81269 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Atf1P81269 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.98□□□□□ -0.65
Atf1P81269 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Atf1P81269 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.98□□□□□ -0.65
Atf1P81269 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Atf1P81269 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Atf1P81269 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.98□□□□□ -0.65
Atf1P81269 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Atf1P81269 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Atf1P81269 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.98□□□□□ -0.65
Atf1P81269 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.98□□□□□ -0.65
Atf1P81269 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Atf1P81269 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Atf1P81269 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Atf1P81269 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atf1P81269 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atf1P81269 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Atf1P81269 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atf1P81269 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atf1P81269 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atf1P81269 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atf1P81269 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Atf1P81269 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Atf1P81269 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Atf1P81269 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.97□□□□□ -0.65
Atf1P81269 Gm11814-201ENSMUST00000119515 929 ntBASIC10.97□□□□□ -0.65
Atf1P81269 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC10.97□□□□□ -0.65
Atf1P81269 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Atf1P81269 Gm9002-201ENSMUST00000178437 499 ntBASIC10.97□□□□□ -0.65
Atf1P81269 Gm24196-201ENSMUST00000179161 110 ntBASIC10.97□□□□□ -0.65
Atf1P81269 Gm8652-201ENSMUST00000181363 964 ntBASIC10.97□□□□□ -0.65
Atf1P81269 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atf1P81269 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.97□□□□□ -0.65
Atf1P81269 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.97□□□□□ -0.65
Atf1P81269 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atf1P81269 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atf1P81269 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.97□□□□□ -0.65
Atf1P81269 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Atf1P81269 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.97□□□□□ -0.65
Atf1P81269 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Atf1P81269 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atf1P81269 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atf1P81269 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atf1P81269 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Atf1P81269 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Atf1P81269 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atf1P81269 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Atf1P81269 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Atf1P81269 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atf1P81269 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
Atf1P81269 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atf1P81269 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atf1P81269 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atf1P81269 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Atf1P81269 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Atf1P81269 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Atf1P81269 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Atf1P81269 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Atf1P81269 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.96□□□□□ -0.65
Atf1P81269 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Atf1P81269 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atf1P81269 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atf1P81269 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atf1P81269 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.96□□□□□ -0.65
Atf1P81269 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Atf1P81269 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Atf1P81269 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atf1P81269 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Atf1P81269 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Atf1P81269 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atf1P81269 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.96□□□□□ -0.65
Atf1P81269 Gm13050-201ENSMUST00000122149 1345 ntBASIC10.96□□□□□ -0.65
Atf1P81269 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Atf1P81269 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.96□□□□□ -0.65
Atf1P81269 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.96□□□□□ -0.65
Atf1P81269 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.96□□□□□ -0.65
Atf1P81269 Gm12138-201ENSMUST00000122180 951 ntBASIC10.96□□□□□ -0.65
Atf1P81269 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.96□□□□□ -0.65
Atf1P81269 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.96□□□□□ -0.65
Atf1P81269 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.96□□□□□ -0.65
Atf1P81269 Gm9630-201ENSMUST00000178304 885 ntBASIC10.96□□□□□ -0.65
Atf1P81269 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.96□□□□□ -0.65
Atf1P81269 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.96□□□□□ -0.65
Atf1P81269 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC10.96□□□□□ -0.65
Atf1P81269 Gm44124-201ENSMUST00000204159 472 ntBASIC10.96□□□□□ -0.65
Atf1P81269 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atf1P81269 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atf1P81269 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atf1P81269 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Atf1P81269 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms