Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm15547-201ENSMUST00000122152 333 ntBASIC13.73□□□□□ -0.21
CiitaP79621 Gm24845-201ENSMUST00000158034 109 ntBASIC13.73□□□□□ -0.21
CiitaP79621 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.73□□□□□ -0.21
CiitaP79621 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.73□□□□□ -0.21
CiitaP79621 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.73□□□□□ -0.21
CiitaP79621 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CiitaP79621 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CiitaP79621 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CiitaP79621 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CiitaP79621 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CiitaP79621 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CiitaP79621 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CiitaP79621 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CiitaP79621 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CiitaP79621 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CiitaP79621 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CiitaP79621 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.73□□□□□ -0.21
CiitaP79621 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CiitaP79621 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CiitaP79621 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CiitaP79621 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CiitaP79621 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CiitaP79621 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CiitaP79621 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CiitaP79621 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.72□□□□□ -0.21
CiitaP79621 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CiitaP79621 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CiitaP79621 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CiitaP79621 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CiitaP79621 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CiitaP79621 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.72□□□□□ -0.21
CiitaP79621 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CiitaP79621 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CiitaP79621 Gm24830-201ENSMUST00000102024 166 ntBASIC13.72□□□□□ -0.21
CiitaP79621 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CiitaP79621 Gm13570-201ENSMUST00000140763 309 ntBASIC13.72□□□□□ -0.21
CiitaP79621 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.72□□□□□ -0.21
CiitaP79621 Gm25890-201ENSMUST00000177643 165 ntBASIC13.72□□□□□ -0.21
CiitaP79621 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.72□□□□□ -0.21
CiitaP79621 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.72□□□□□ -0.21
CiitaP79621 Gm22614-201ENSMUST00000178300 165 ntBASIC13.72□□□□□ -0.21
CiitaP79621 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CiitaP79621 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CiitaP79621 AA914427-201ENSMUST00000193194 1166 ntBASIC13.72□□□□□ -0.21
CiitaP79621 Gm38317-201ENSMUST00000195564 343 ntBASIC13.72□□□□□ -0.21
CiitaP79621 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.72□□□□□ -0.21
CiitaP79621 Gm13097-201ENSMUST00000210722 397 ntBASIC13.72□□□□□ -0.21
CiitaP79621 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.72□□□□□ -0.21
CiitaP79621 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CiitaP79621 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.72□□□□□ -0.21
CiitaP79621 Gm22042-201ENSMUST00000082989 165 ntBASIC13.72□□□□□ -0.21
CiitaP79621 Gm26232-201ENSMUST00000083360 166 ntBASIC13.72□□□□□ -0.21
CiitaP79621 Gm24136-201ENSMUST00000083374 165 ntBASIC13.72□□□□□ -0.21
CiitaP79621 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.72□□□□□ -0.21
CiitaP79621 Gm26110-201ENSMUST00000083971 165 ntBASIC13.72□□□□□ -0.21
CiitaP79621 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CiitaP79621 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CiitaP79621 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CiitaP79621 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CiitaP79621 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
CiitaP79621 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CiitaP79621 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.72□□□□□ -0.21
CiitaP79621 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CiitaP79621 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.72□□□□□ -0.21
CiitaP79621 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CiitaP79621 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CiitaP79621 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CiitaP79621 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CiitaP79621 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CiitaP79621 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CiitaP79621 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CiitaP79621 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CiitaP79621 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CiitaP79621 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CiitaP79621 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
CiitaP79621 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CiitaP79621 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CiitaP79621 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CiitaP79621 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CiitaP79621 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CiitaP79621 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CiitaP79621 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
CiitaP79621 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CiitaP79621 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.71□□□□□ -0.21
CiitaP79621 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CiitaP79621 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.71□□□□□ -0.21
CiitaP79621 Gm27023-201ENSMUST00000182372 285 ntBASIC13.71□□□□□ -0.21
CiitaP79621 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CiitaP79621 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CiitaP79621 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.71□□□□□ -0.21
CiitaP79621 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CiitaP79621 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CiitaP79621 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CiitaP79621 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CiitaP79621 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CiitaP79621 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CiitaP79621 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.71□□□□□ -0.22
CiitaP79621 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.71□□□□□ -0.22
CiitaP79621 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CiitaP79621 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms