Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pdlim4P70271 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.6□□□□□ -0.71
Pdlim4P70271 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Pdlim4P70271 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.59□□□□□ -0.71
Pdlim4P70271 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Pdlim4P70271 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.59□□□□□ -0.71
Pdlim4P70271 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
Pdlim4P70271 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Pdlim4P70271 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Pdlim4P70271 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 Mir686-201ENSMUST00000102174 109 ntBASIC10.59□□□□□ -0.71
Pdlim4P70271 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.59□□□□□ -0.71
Pdlim4P70271 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC10.59□□□□□ -0.71
Pdlim4P70271 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 Gm17208-201ENSMUST00000168388 535 ntBASIC10.59□□□□□ -0.71
Pdlim4P70271 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Pdlim4P70271 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
Pdlim4P70271 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.59□□□□□ -0.71
Pdlim4P70271 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.59□□□□□ -0.71
Pdlim4P70271 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Pdlim4P70271 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Pdlim4P70271 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.59□□□□□ -0.71
Pdlim4P70271 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Pdlim4P70271 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pdlim4P70271 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.71
Pdlim4P70271 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdlim4P70271 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdlim4P70271 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdlim4P70271 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.58□□□□□ -0.72
Pdlim4P70271 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdlim4P70271 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdlim4P70271 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Pdlim4P70271 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdlim4P70271 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdlim4P70271 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pdlim4P70271 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdlim4P70271 Gm14660-201ENSMUST00000119809 575 ntBASIC10.58□□□□□ -0.72
Pdlim4P70271 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pdlim4P70271 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.58□□□□□ -0.72
Pdlim4P70271 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pdlim4P70271 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdlim4P70271 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.58□□□□□ -0.72
Pdlim4P70271 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdlim4P70271 Gm27682-201ENSMUST00000183930 110 ntBASIC10.58□□□□□ -0.72
Pdlim4P70271 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC10.58□□□□□ -0.72
Pdlim4P70271 Gm4768-201ENSMUST00000206199 686 ntBASIC10.58□□□□□ -0.72
Pdlim4P70271 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.58□□□□□ -0.72
Pdlim4P70271 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.58□□□□□ -0.72
Pdlim4P70271 Gm19163-201ENSMUST00000223313 780 ntBASIC10.58□□□□□ -0.72
Pdlim4P70271 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdlim4P70271 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Pdlim4P70271 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdlim4P70271 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdlim4P70271 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdlim4P70271 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pdlim4P70271 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdlim4P70271 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdlim4P70271 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdlim4P70271 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pdlim4P70271 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Pdlim4P70271 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Pdlim4P70271 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Pdlim4P70271 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdlim4P70271 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Pdlim4P70271 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Pdlim4P70271 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Pdlim4P70271 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.58□□□□□ -0.72
Pdlim4P70271 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pdlim4P70271 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pdlim4P70271 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pdlim4P70271 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Pdlim4P70271 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Pdlim4P70271 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms