Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crnkl1P63154 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.57□□□□□ -0.4
Crnkl1P63154 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crnkl1P63154 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Crnkl1P63154 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Crnkl1P63154 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.56□□□□□ -0.4
Crnkl1P63154 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.56□□□□□ -0.4
Crnkl1P63154 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.56□□□□□ -0.4
Crnkl1P63154 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.56□□□□□ -0.4
Crnkl1P63154 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.56□□□□□ -0.4
Crnkl1P63154 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Crnkl1P63154 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Crnkl1P63154 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.56□□□□□ -0.4
Crnkl1P63154 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Crnkl1P63154 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.56□□□□□ -0.4
Crnkl1P63154 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Crnkl1P63154 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Crnkl1P63154 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Crnkl1P63154 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Crnkl1P63154 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Crnkl1P63154 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Crnkl1P63154 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Crnkl1P63154 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Crnkl1P63154 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Crnkl1P63154 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Crnkl1P63154 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Crnkl1P63154 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.55□□□□□ -0.4
Crnkl1P63154 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
Crnkl1P63154 Gm15770-201ENSMUST00000117498 584 ntBASIC12.55□□□□□ -0.4
Crnkl1P63154 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Crnkl1P63154 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Crnkl1P63154 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Crnkl1P63154 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Crnkl1P63154 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.55□□□□□ -0.4
Crnkl1P63154 Gm27390-201ENSMUST00000184516 176 ntBASIC12.55□□□□□ -0.4
Crnkl1P63154 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Crnkl1P63154 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Crnkl1P63154 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Crnkl1P63154 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Crnkl1P63154 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Crnkl1P63154 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Crnkl1P63154 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Crnkl1P63154 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Crnkl1P63154 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Crnkl1P63154 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Crnkl1P63154 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Crnkl1P63154 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.55□□□□□ -0.4
Crnkl1P63154 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Crnkl1P63154 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.55□□□□□ -0.4
Crnkl1P63154 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Crnkl1P63154 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Crnkl1P63154 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Crnkl1P63154 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.54□□□□□ -0.4
Crnkl1P63154 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Crnkl1P63154 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Crnkl1P63154 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Crnkl1P63154 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Crnkl1P63154 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Crnkl1P63154 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Crnkl1P63154 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Crnkl1P63154 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Crnkl1P63154 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Crnkl1P63154 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Crnkl1P63154 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Crnkl1P63154 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Crnkl1P63154 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Crnkl1P63154 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Crnkl1P63154 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Crnkl1P63154 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Crnkl1P63154 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Crnkl1P63154 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Crnkl1P63154 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Crnkl1P63154 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms