Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.99□□□□□ -0.33
Ybx1P62960 Gm44651-201ENSMUST00000207343 372 ntBASIC12.99□□□□□ -0.33
Ybx1P62960 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Ybx1P62960 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.99□□□□□ -0.33
Ybx1P62960 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ybx1P62960 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ybx1P62960 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ybx1P62960 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Ybx1P62960 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ybx1P62960 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ybx1P62960 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ybx1P62960 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ybx1P62960 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ybx1P62960 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ybx1P62960 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ybx1P62960 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ybx1P62960 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.98□□□□□ -0.33
Ybx1P62960 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ybx1P62960 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ybx1P62960 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ybx1P62960 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ybx1P62960 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ybx1P62960 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ybx1P62960 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ybx1P62960 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ybx1P62960 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Ybx1P62960 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ybx1P62960 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ybx1P62960 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.98□□□□□ -0.33
Ybx1P62960 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ybx1P62960 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ybx1P62960 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ybx1P62960 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.98□□□□□ -0.33
Ybx1P62960 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ybx1P62960 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ybx1P62960 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ybx1P62960 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.98□□□□□ -0.33
Ybx1P62960 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ybx1P62960 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Ybx1P62960 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ybx1P62960 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ybx1P62960 Gm14832-201ENSMUST00000121289 322 ntBASIC12.98□□□□□ -0.33
Ybx1P62960 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
Ybx1P62960 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ybx1P62960 Gm20426-201ENSMUST00000173657 440 ntBASIC12.98□□□□□ -0.33
Ybx1P62960 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ybx1P62960 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Ybx1P62960 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ybx1P62960 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ybx1P62960 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ybx1P62960 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ybx1P62960 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ybx1P62960 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Ybx1P62960 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ybx1P62960 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ybx1P62960 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.98□□□□□ -0.33
Ybx1P62960 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ybx1P62960 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ybx1P62960 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ybx1P62960 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ybx1P62960 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.98□□□□□ -0.33
Ybx1P62960 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ybx1P62960 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ybx1P62960 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ybx1P62960 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.97□□□□□ -0.33
Ybx1P62960 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ybx1P62960 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.97□□□□□ -0.33
Ybx1P62960 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ybx1P62960 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ybx1P62960 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Ybx1P62960 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ybx1P62960 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ybx1P62960 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.97□□□□□ -0.33
Ybx1P62960 Gm14921-201ENSMUST00000118643 908 ntBASIC12.97□□□□□ -0.33
Ybx1P62960 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ybx1P62960 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.97□□□□□ -0.33
Ybx1P62960 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.97□□□□□ -0.33
Ybx1P62960 Gm5523-201ENSMUST00000180415 997 ntBASIC12.97□□□□□ -0.33
Ybx1P62960 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ybx1P62960 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ybx1P62960 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.97□□□□□ -0.33
Ybx1P62960 Gm39404-201ENSMUST00000216350 313 ntBASIC12.97□□□□□ -0.33
Ybx1P62960 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ybx1P62960 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.97□□□□□ -0.33
Ybx1P62960 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.97□□□□□ -0.33
Ybx1P62960 Gm10312-201ENSMUST00000078515 489 ntBASIC12.97□□□□□ -0.33
Ybx1P62960 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ybx1P62960 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ybx1P62960 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ybx1P62960 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ybx1P62960 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.97□□□□□ -0.33
Ybx1P62960 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Ybx1P62960 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.97□□□□□ -0.33
Ybx1P62960 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ybx1P62960 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ybx1P62960 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ybx1P62960 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ybx1P62960 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ybx1P62960 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Ybx1P62960 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms