Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.52□□□□□ -0.56
Lsm3P62311 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lsm3P62311 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm3P62311 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm3P62311 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.52□□□□□ -0.57
Lsm3P62311 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.52□□□□□ -0.57
Lsm3P62311 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.52□□□□□ -0.57
Lsm3P62311 Gm9103-201ENSMUST00000119371 405 ntBASIC11.52□□□□□ -0.57
Lsm3P62311 Gm15393-201ENSMUST00000120499 219 ntBASIC11.52□□□□□ -0.57
Lsm3P62311 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.52□□□□□ -0.57
Lsm3P62311 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm3P62311 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm3P62311 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.52□□□□□ -0.57
Lsm3P62311 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.52□□□□□ -0.57
Lsm3P62311 Gm9824-201ENSMUST00000178707 561 ntBASIC11.52□□□□□ -0.57
Lsm3P62311 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm3P62311 Gm27390-201ENSMUST00000184516 176 ntBASIC11.52□□□□□ -0.57
Lsm3P62311 Gm10766-202ENSMUST00000194123 606 ntBASIC11.52□□□□□ -0.57
Lsm3P62311 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm3P62311 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.52□□□□□ -0.57
Lsm3P62311 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm3P62311 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm3P62311 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm3P62311 Gm10819-201ENSMUST00000099988 561 ntBASIC11.52□□□□□ -0.57
Lsm3P62311 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm3P62311 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm3P62311 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm3P62311 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm3P62311 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm3P62311 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.52□□□□□ -0.57
Lsm3P62311 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm3P62311 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm3P62311 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm3P62311 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm3P62311 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm3P62311 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Lsm3P62311 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm3P62311 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm3P62311 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm3P62311 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.52□□□□□ -0.57
Lsm3P62311 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm3P62311 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm3P62311 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm3P62311 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm3P62311 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Lsm3P62311 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm3P62311 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.51□□□□□ -0.57
Lsm3P62311 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.51□□□□□ -0.57
Lsm3P62311 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm3P62311 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.51□□□□□ -0.57
Lsm3P62311 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm3P62311 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.51□□□□□ -0.57
Lsm3P62311 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.51□□□□□ -0.57
Lsm3P62311 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Lsm3P62311 Gm29541-201ENSMUST00000191351 678 ntBASIC11.51□□□□□ -0.57
Lsm3P62311 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.51□□□□□ -0.57
Lsm3P62311 Gm2651-201ENSMUST00000203560 838 ntBASIC11.51□□□□□ -0.57
Lsm3P62311 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Lsm3P62311 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm3P62311 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm3P62311 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm3P62311 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm3P62311 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.51□□□□□ -0.57
Lsm3P62311 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm3P62311 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Lsm3P62311 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm3P62311 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm3P62311 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm3P62311 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Lsm3P62311 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm3P62311 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Lsm3P62311 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm3P62311 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lsm3P62311 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Lsm3P62311 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.51□□□□□ -0.57
Lsm3P62311 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm3P62311 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm3P62311 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm3P62311 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Lsm3P62311 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm3P62311 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm3P62311 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm3P62311 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm3P62311 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm3P62311 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Lsm3P62311 Gm24543-201ENSMUST00000103867 82 ntBASIC11.5□□□□□ -0.57
Lsm3P62311 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm3P62311 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Lsm3P62311 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.5□□□□□ -0.57
Lsm3P62311 Rprl2-201ENSMUST00000157150 290 ntBASIC11.5□□□□□ -0.57
Lsm3P62311 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Lsm3P62311 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.5□□□□□ -0.57
Lsm3P62311 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.5□□□□□ -0.57
Lsm3P62311 Gm18195-201ENSMUST00000207604 706 ntBASIC11.5□□□□□ -0.57
Lsm3P62311 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.5□□□□□ -0.57
Lsm3P62311 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm3P62311 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm3P62311 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lsm3P62311 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Lsm3P62311 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms