Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.2□□□□□ -0.62
Sec61a1P61620 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Sec61a1P61620 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.2□□□□□ -0.62
Sec61a1P61620 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.2□□□□□ -0.62
Sec61a1P61620 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.19□□□□□ -0.62
Sec61a1P61620 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.19□□□□□ -0.62
Sec61a1P61620 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.19□□□□□ -0.62
Sec61a1P61620 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Sec61a1P61620 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.19□□□□□ -0.62
Sec61a1P61620 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Sec61a1P61620 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.19□□□□□ -0.62
Sec61a1P61620 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.19□□□□□ -0.62
Sec61a1P61620 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Sec61a1P61620 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Sec61a1P61620 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Sec61a1P61620 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.19□□□□□ -0.62
Sec61a1P61620 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.19□□□□□ -0.62
Sec61a1P61620 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.19□□□□□ -0.62
Sec61a1P61620 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Sec61a1P61620 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.19□□□□□ -0.62
Sec61a1P61620 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.19□□□□□ -0.62
Sec61a1P61620 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Sec61a1P61620 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.19□□□□□ -0.62
Sec61a1P61620 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.19□□□□□ -0.62
Sec61a1P61620 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Sec61a1P61620 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sec61a1P61620 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61a1P61620 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61a1P61620 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61a1P61620 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61a1P61620 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61a1P61620 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61a1P61620 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61a1P61620 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.18□□□□□ -0.62
Sec61a1P61620 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.18□□□□□ -0.62
Sec61a1P61620 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61a1P61620 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61a1P61620 Daam2-202ENSMUST00000224595 1926 ntBASIC11.18□□□□□ -0.62
Sec61a1P61620 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61a1P61620 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61a1P61620 Mir1894-201ENSMUST00000122802 81 ntBASIC11.18□□□□□ -0.62
Sec61a1P61620 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61a1P61620 Gm17150-201ENSMUST00000165577 381 ntBASIC11.18□□□□□ -0.62
Sec61a1P61620 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61a1P61620 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61a1P61620 Gm38223-201ENSMUST00000194484 695 ntBASIC11.18□□□□□ -0.62
Sec61a1P61620 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61a1P61620 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61a1P61620 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.18□□□□□ -0.62
Sec61a1P61620 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.18□□□□□ -0.62
Sec61a1P61620 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.18□□□□□ -0.62
Sec61a1P61620 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61a1P61620 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61a1P61620 Gm5161-201ENSMUST00000075243 853 ntBASIC11.18□□□□□ -0.62
Sec61a1P61620 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61a1P61620 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Sec61a1P61620 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Sec61a1P61620 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Sec61a1P61620 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.18□□□□□ -0.62
Sec61a1P61620 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61a1P61620 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61a1P61620 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61a1P61620 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61a1P61620 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61a1P61620 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61a1P61620 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sec61a1P61620 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms